The detailed information of tRNA gene sequence


Sequence ID>WENV180080426
Genome IDMPMC02015088
Search identical group
Phylum/Class[MPMC] marine metagenome; 100 m water sample filtered on 30 um supor filter
Species
Start position on genome 1213
End posion on genome 1123
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
ggcgccccgc
tRNA gene sequence 
GGAGAGGTGGCTGAGTGGTTGAAAGCGCACGCCTGGAAAGTGTGTATACGTTAATAGCGT
ATCGAGGGTTCGAATCCCTCCCTCTCCGCCA
Downstream region at tRNA end position 
gtttttgcga
Secondary structure (Cloverleaf model)
>WENV180080426	Ser	GGA
                   c      GCCA gtttttgcga
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G T C G       G A G G G     C
    G         | | |                 T T
    T       A A G C
      T G A        G     TATACGTTAATAGCGTATC
                    C - G
                    A - T
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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