The detailed information of tRNA gene sequence


Sequence ID>WENV180081301
Genome IDMPMC02103465
Search identical group
Phylum/Class[MPMC] marine metagenome; 100 m water sample filtered on 30 um supor filter
Species
Start position on genome 142
End posion on genome 69
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
tgctgtataa
tRNA gene sequence 
ACGGGTGTAGCTCAATTGGTAGAGTAGTGGTCTCCAAAACCATTGGCTGGGAGTTCGAGT
CTCTCCACCCGTGCtt
Downstream region at tRNA end position 
ttaaagagaa
Secondary structure (Cloverleaf model)
>WENV180081301	Trp	CCA
                   a      GCtt ttaaagagaa
                     A - T
                     C - G
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T G
                    T     C T C T C     A
      T A A        A      | + | | |     G
    T       C T C G       G G G A G     C
    G       | | | +                 T T
    G       G A G T
      T A          A     TGGCT
                    G + T
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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