The detailed information of tRNA gene sequence


Sequence ID>WENV180082024
Genome IDMPMC02175279
Search identical group
Phylum/Class[MPMC] marine metagenome; 100 m water sample filtered on 30 um supor filter
Species
Start position on genome 462
End posion on genome 387
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
cctcaagcgt
tRNA gene sequence 
GGGCGATTAACTCAATTGGTAGAGTGCCATGTTCACAGCGTGGAGGTTACTGGTTCGAGT
CCAGTATCGCCCACCA
Downstream region at tRNA end position 
gcccacgcgc
Secondary structure (Cloverleaf model)
>WENV180082024	Val	CAC
                   t      ACCA gcccacgcgc
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     A - T
                     T - A          T G
                    T     T G A C C     A
      T A A        A      | | | | |     G
    T       C T C A       A C T G G     C
    G       | | | |                 T T
    G       G A G T
      T A          G     AGGTT
                    C - G
                    C - G
                    A - T
                    T + G
                    G - C
                  T       G
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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