The detailed information of tRNA gene sequence


Sequence ID>WENV180082748
Genome IDMPMC02254786
Search identical group
Phylum/Class[MPMC] marine metagenome; 100 m water sample filtered on 30 um supor filter
Species
Start position on genome 4160
End posion on genome 4086
Amino Acid fMet
Anticodon CAT
Upstream region at tRNA start position 
ataaataggg
tRNA gene sequence 
CGCGGGGTGGAGCAGTCCGGTAGCTCGCGAGGCTCATAACCTCGAGGTCGCAGGTTCGAA
TCCTGTCCCCGCAACtt
Downstream region at tRNA end position 
ttttattttt
Secondary structure (Cloverleaf model)
>WENV180082748	fMet	CAT
                   g      ACtt ttttattttt
                     C   A
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     T G T C C     A
      T G A        G      + | | | |     G
    C       C G A G       G C A G G     C
    C       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    C - G
                    G - C
                    A - T
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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