The detailed information of tRNA gene sequence


Sequence ID>WENV180082781
Genome IDMPMC02257088
Search identical group
Phylum/Class[MPMC] marine metagenome; 100 m water sample filtered on 30 um supor filter
Species
Start position on genome 580
End posion on genome 506
Amino Acid fMet
Anticodon CAT
Upstream region at tRNA start position 
aattaatgat
tRNA gene sequence 
CGCGGGGTAGAGCAGTCTGGTAGCTCGTCGGGCTCATAACCCGGAGGTCACAGGTTCAAA
TCCTGTCCCCGCTACag
Downstream region at tRNA end position 
aagaaaaacc
Secondary structure (Cloverleaf model)
>WENV180082781	fMet	CAT
                   t      ACag aagaaaaacc
                     C   T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     T G T C C     A
      T G A        A      | | | | |     A
    C       C G A G       A C A G G     C
    T       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T + G
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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