The detailed information of tRNA gene sequence


Sequence ID>WENV180083682
Genome IDMPMD02096668
Search identical group
Phylum/Class[MPMD] marine metagenome; 120 m water sample filtered on 30 um supor filter
Species
Start position on genome 11
End posion on genome 87
Amino Acid fMet
Anticodon CAT
Upstream region at tRNA start position 
ctcaccttgt
tRNA gene sequence 
TGCGGGGTGGAGCAGCCAGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTAGGTTCGAA
TCCTACCCCCGCTACCA
Downstream region at tRNA end position 
ccgagaaccg
Secondary structure (Cloverleaf model)
>WENV180083682	fMet	CAT
                   t      ACCA ccgagaaccg
                     T   T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C A T C C     A
      C G A        G      | | | | |     G
    C       C G A G       G T A G G     C
    A       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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