The detailed information of tRNA gene sequence


Sequence ID>WENV180084421
Genome IDMPMD02187610
Search identical group
Phylum/Class[MPMD] marine metagenome; 120 m water sample filtered on 30 um supor filter
Species
Start position on genome 2785
End posion on genome 2861
Amino Acid fMet
Anticodon CAT
Upstream region at tRNA start position 
ggtttatgaa
tRNA gene sequence 
CGCGGGGTGGAGCAGTCTGGCAGCTCGTCGGGCTCATAACCCGAAGGTCGCAGGTTCAAA
TCCTGCCTCCGCTACCA
Downstream region at tRNA end position 
taatataaaa
Secondary structure (Cloverleaf model)
>WENV180084421	fMet	CAT
                   a      ACCA taatataaaa
                     C   T
                     G - C
                     C - G
                     G - C
                     G - C
                     G + T
                     G - C          T A
                    T     C G T C C     A
      T G A        G      | | | | |     A
    C       C G A G       G C A G G     C
    T       | | | |                 T T
    G       G C T C
      G C A        G     AGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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