The detailed information of tRNA gene sequence


Sequence ID>WENV180085138
Genome IDMPMD02286724
Search identical group
Phylum/Class[MPMD] marine metagenome; 120 m water sample filtered on 30 um supor filter
Species
Start position on genome 260
End posion on genome 350
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
gcgtgccgcT
tRNA gene sequence 
GGAGAGGTGGCTGAGTGGTTGAAAGCGGCTCCCTGCTAAGGAGTTACAGGAGGCAACTTC
TGTCGAGGGTTCGAATCCCTCCCTCTCCGTtc
Downstream region at tRNA end position 
caaaatccct
Secondary structure (Cloverleaf model)
>WENV180085138	Ser	GCT
                   T      GTtc caaaatccct
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G T C G       G A G G G     C
    G         | | |                 T T
    T       A A G C
      T G A        G     TACAGGAGGCAACTTCTGTC
                    G + T
                    C - G
                    T - A
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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