The detailed information of tRNA gene sequence


Sequence ID>WENV180086150
Genome IDMPMD02428297
Search identical group
Phylum/Class[MPMD] marine metagenome; 120 m water sample filtered on 30 um supor filter
Species
Start position on genome 282
End posion on genome 193
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
aaaacaatgc
tRNA gene sequence 
GGAGAGGTGCCGGAGTGGTCGAACGGGGCGGTCTCGAAAACCGTTGAGCCTTCACGGGTT
CCCAGGGTTCGAATCCCTGTCTCTCCGCCA
Downstream region at tRNA end position 
gttttcctag
Secondary structure (Cloverleaf model)
>WENV180086150	Ser	CGA
                   c      GCCA gttttcctag
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     G T C C C     A
      T G A        G      | | | | |     G
    G       G G C C       C A G G G     C
    G         | | |                 T T
    T       A C G G
      C G A        G     TGAGCCTTCACGGGTTCC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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