The detailed information of tRNA gene sequence


Sequence ID>WENV180086219
Genome IDMPMD02437946
Search identical group
Phylum/Class[MPMD] marine metagenome; 120 m water sample filtered on 30 um supor filter
Species
Start position on genome 16367
End posion on genome 16443
Amino Acid fMet
Anticodon CAT
Upstream region at tRNA start position 
agcctgtcgg
tRNA gene sequence 
TGCGGGGTGGAGCAGTCTGGCAGCTCGTCGGGCTCATAACCCGAAGGTCGCAGGTTCAAA
TCCTGCCCCCGCTACCA
Downstream region at tRNA end position 
atttttccgc
Secondary structure (Cloverleaf model)
>WENV180086219	fMet	CAT
                   g      ACCA atttttccgc
                     T   T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C G T C C     A
      T G A        G      | | | | |     A
    C       C G A G       G C A G G     C
    T       | | | |                 T T
    G       G C T C
      G C A        G     AGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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