The detailed information of tRNA gene sequence


Sequence ID>WENV180090977
Genome IDMPMF02168208
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 3525
End posion on genome 3615
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
agattccgtc
tRNA gene sequence 
GGAGGGGTGCTAGAGCGGACGAATAGGGCGGCCTGCTAAGCCGTTGCACGGTTCATTCCG
TGCCGTGGGTTCGAATCCCACCCCCTCCGCCt
Downstream region at tRNA end position 
ttccccaaag
Secondary structure (Cloverleaf model)
>WENV180090977	Ser	GCT
                   c      GCCt ttccccaaag
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C A C C C     A
      C G A        G      | | | | |     G
    G       G A T C       G T G G G     C
    G         | | |                 T T
    A       A T A G
      C G A        G     TGCACGGTTCATTCCGTGCC
                    G + T
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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