The detailed information of tRNA gene sequence


Sequence ID>WENV180092582
Genome IDMPMF02268631
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 808
End posion on genome 713
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
gatcggcgct
tRNA gene sequence 
GGAAGGGGAACGCGACCCGGTGGTGCGCCCGGACTTCAAATCCGGTGAGGCGCGCAAGGC
GTGCCTGGTGGGTTCGACTCCCACCCTCTTCCGCCA
Downstream region at tRNA end position 
aacttgggaa
Secondary structure (Cloverleaf model)
>WENV180092582	SeC	TCA
                   t      GCCA aacttgggaa
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     G + T
                     G - C
                     G - C          T C
                    A     C A C C C     A
      C C A        A      | | | | |     G
    C       G C G C       G T G G G     C
    G       + | | |                 T T
    G       T G C G
      T G G        C     TGAGGCGCGCAAGGCGTGCCTG
                    C - G
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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