The detailed information of tRNA gene sequence


Sequence ID>WENV180093940
Genome IDMPMF02355785
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 388
End posion on genome 477
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
acctcgggtc
tRNA gene sequence 
GGAGAGGTGACCGAGTGGCTGAAGGTGCTCGCCTGGAAAGCGGGTGTGTCAGCAATGGCA
CCGCGGGTTCGAATCCCGCACTCTCCGCCA
Downstream region at tRNA end position 
accccgcgga
Secondary structure (Cloverleaf model)
>WENV180093940	Ser	GGA
                   c      GCCA accccgcgga
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G   A          T A
                    T     C G C C C     A
      T G A        G      | | | | |     G
    G       G C C A       G C G G G     C
    G         | | |                 T T
    C       A G G T
      T G A        G     TGTGTCAGCAATGGCACC
                    C - G
                    T + G
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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