The detailed information of tRNA gene sequence


Sequence ID>W141007537
Genome IDAGWZ01000001
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesAfipia felis ATCC 53690 [AGWZ]
Start position on genome 3181715
End posion on genome 3181806
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
gccggataat
tRNA gene sequence 
GGAGGAGAATCGTCCCTGGTGGGACGTCCGGACTTCAAATCCGGGAAGGACCGTCGGACG
GTTCTTGGTGGGTTCGACTCCCGCTCTCTTCCgcca
Downstream region at tRNA end position 
tccgttgcgc
Secondary structure (Cloverleaf model)
>W141007537	SeC(p)	TCA
                   t      gcca tccgttgcgc
                     G - C
                     G - C
                     A - T
                     G + T
                     G - C
                     A - T
                     G - C
                     A - T          T C
                    A     C G C C C     A
      T C C        T      | + | | |     G
    G       C T G C       G T G G G     C
    G       | | | |                 T T
    T       G A C G
      G G          T     GAAGGACCGTCGGACGGTTCTTG
                    C - G
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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