The detailed information of tRNA gene sequence


Sequence ID>WENV180094334
Genome IDMTBK01002698
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 457
End posion on genome 544
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
gaaactttaa
tRNA gene sequence 
GCCGAGGTCGCATAGCTAGGATTAGTGCGCCGGACTTGAGATCCGGTTTCCCCTAGGGAA
GCGGGAGTTCAAATCTCCCCCTCGGCGCtt
Downstream region at tRNA end position 
tctgtttttt
Secondary structure (Cloverleaf model)
>WENV180094334	Ser	TGA
                   a      GCtt tctgtttttt
                     G - C
                     C - G
                     C - G
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C C C T C     A
    T C G A        C      | | | | |     A
  A         T A C G       G G G A G     C
  G         + | | |                 T T
  G         G T G C
    A T T A        G     TTTCCCCTAGGGAAGC
                    C - G
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       G
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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