The detailed information of tRNA gene sequence


Sequence ID>WENV180094580
Genome IDMTBK01016194
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 5212
End posion on genome 5138
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
ctaaatacgt
tRNA gene sequence 
GGCCCCTTGGTCAAGCGGTTAAGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGATTC
CCCTAGGGGTCACCA
Downstream region at tRNA end position 
tcctagagat
Secondary structure (Cloverleaf model)
>WENV180094580	Glu	TTC
                   t      ACCA tcctagagat
                     G - C
                     G + T
                     C - G
                     C - G
                     C - G
                     C - G
                     T - A          T T
                    T     T C C C C     A
      C G A        G      | | | | |     G
    G       A C T G       A G G G G     C
    G         | | |                 T T
    T       A G A C
      T A          A     TAAC
                    C - G
                    C - G
                    G - C
                    C - G
                    C - G
                  C       C
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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