The detailed information of tRNA gene sequence


Sequence ID>WENV180094631
Genome IDMTBK01019390
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 1193
End posion on genome 1107
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
gggtacacca
tRNA gene sequence 
GGAGAGATGCCTGAGCGGTCGAAAGGACACGCTTGGAGAGCGTGCGTATGAGAAATCGTA
CCGTGGGTTCGAATCCCACTCTCTCCGtac
Downstream region at tRNA end position 
atactatact
Secondary structure (Cloverleaf model)
>WENV180094631	Ser	GGA
                   a      Gtac atactatact
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C A C C C     A
      C G A        G      | | | | |     G
    G       G T C C       G T G G G     C
    G         | | |                 T T
    T       A A G G
      C G A        A     CGTATGAGAAATCGTACC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  T       A
                  T       G
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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