The detailed information of tRNA gene sequence


Sequence ID>WENV180094890
Genome IDMTBK01037492
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 482
End posion on genome 566
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
ttttgcctcg
tRNA gene sequence 
GGCGAGATCGCATAGTGGACGAGTGCAGCCGCCTTGAAAGCGGCCGAGGGAAACCTCCGT
GGGTTCGAATCCCACTCTCGCCGCCc
Downstream region at tRNA end position 
tgtgcaggga
Secondary structure (Cloverleaf model)
>WENV180094890	Ser	TGA
                   g      GCCc tgtgcaggga
                     G - C
                     G - C
                     C - G
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C A C C C     A
      T G A        C      | | | | |     G
    G       T A C G       G T G G G     C
    G       + | | |                 T T
    A       G T G C
      C G A        A     CGAGGGAAACCTCC
                    G - C
                    C - G
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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