The detailed information of tRNA gene sequence


Sequence ID>WENV180094945
Genome IDMTBK01039818
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 104
End posion on genome 178
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
agtccgaaat
tRNA gene sequence 
GGCGAGGTAGCTCAGCAGGTTAGAGCGCATGATTCATAATCATGAGGTCGGCGGTTCAAG
TCCGCCTCTCGCTACtt
Downstream region at tRNA end position 
gaaaatcaaa
Secondary structure (Cloverleaf model)
>WENV180094945	Met	CAT
                   t      ACtt gaaaatcaaa
                     G + T
                     G - C
                     C - G
                     G - C
                     A - T
                     G - C
                     G + T          T G
                    T     C C G C C     A
      C G A        A      | | | | |     A
    A       C T C G       G G C G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    A - T
                    T - A
                    G - C
                    A - T
                  T       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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