The detailed information of tRNA gene sequence


Sequence ID>WENV180095114
Genome IDMTBK01049401
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 10023
End posion on genome 10097
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
tggtggtacc
tRNA gene sequence 
GGGGCAGTAGGGTAGCCTGGTCCATCCTAGAGCGTTTGGGACGCTTTGACGGCAGTTCGA
ATCTGCCCTGCCCCAtca
Downstream region at tRNA end position 
gtcatgaacc
Secondary structure (Cloverleaf model)
>WENV180095114	Pro	TGG
                   c      Atca gtcatgaacc
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     A - T
                     G - C          T A
                    T     C C G T C     A
    C C G A        A      | | | | |     G
  T         T G G G       G G C A G     C
  G           | | +                 T T
  G         T C C T
    T C C A        A     TGAC
                    G + T
                    A - T
                    G - C
                    C - G
                    G - C
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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