The detailed information of tRNA gene sequence


Sequence ID>WENV180095247
Genome IDMTBK01058461
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 1001
End posion on genome 1085
Amino Acid Leu
Anticodon CAG
Upstream region at tRNA start position 
cgccgccgtt
tRNA gene sequence 
GCCCAGGTGGCGGAATTGGTAGACGCGCTGGTTTCAGGTACCAGTGGTGAAAGCCGTGGA
GGTTCGAGTCCTCTCCTGGGCACCA
Downstream region at tRNA end position 
ttcgtctttc
Secondary structure (Cloverleaf model)
>WENV180095247	Leu	CAG
                   t      ACCA ttcgtctttc
                     G - C
                     C - G
                     C - G
                     C - G
                     A - T
                     G - C
                     G - C          T G
                    T     T C T C C     A
      T A A        G      + | | | |     G
    T       G G C G       G G A G G     C
    G         | | |                 T T
    G       A C G C
      T A G        G     TGGTGAAAGCCGT
                    C - G
                    T - A
                    G - C
                    G - C
                    T - A
                  T       T
                  T       G
                    C A G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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