The detailed information of tRNA gene sequence


Sequence ID>WENV180095520
Genome IDMTBK01072913
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 3005
End posion on genome 3089
Amino Acid Leu
Anticodon GAG
Upstream region at tRNA start position 
tcttccccag
tRNA gene sequence 
GCGAGGGTTGCCAAGCCCGGTCAAAGGCGCAAGGTTGAGGGCCTTGTCTCGTAGGAGTTC
GAGCGTTCAAATCGCTCCCCTCGCAttt
Downstream region at tRNA end position 
gttttgtatc
Secondary structure (Cloverleaf model)
>WENV180095520	Leu	GAG
                   g      Attt gttttgtatc
                     G - C
                     C - G
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C          T A
                    T     C T C G C     A
    C C G A        T      | | | | |     A
  C         A C C G       G A G C G     C
  G           | | |                 T T
  G         A G G C
    T C A A        G     TCTCGTAGGAGTTC
                    C - G
                    A - T
                    A - T
                    G - C
                    G - C
                  T       G
                  T       G
                    G A G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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