The detailed information of tRNA gene sequence


Sequence ID>WENV180095627
Genome IDMTBK01078415
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 1781
End posion on genome 1857
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gatgcctcgt
tRNA gene sequence 
GGCAGGGTAGCTCAGCTGGTCAGAGCGCACGACTCATAATCGTGAGGTCGCGGGTTCAAG
CCCCGCTCCTGCTACCA
Downstream region at tRNA end position 
cacccccgga
Secondary structure (Cloverleaf model)
>WENV180095627	Met	CAT
                   t      ACCA cacccccgga
                     G + T
                     G - C
                     C - G
                     A - T
                     G - C
                     G - C
                     G + T          C G
                    T     C G C C C     A
      C G A        A      | | | | |     A
    T       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      T C A        G     AGGTC
                    C - G
                    A - T
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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