The detailed information of tRNA gene sequence


Sequence ID>WENV180095718
Genome IDMTBK01084713
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 204
End posion on genome 128
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
actcgctgtT
tRNA gene sequence 
GGGACAGTGGGGTAGCCTGGTCTATCCTCGAGGGTTTGGGACTCTTGGACCGCGGTTCAA
ATCCGCGCTGTCCCATtt
Downstream region at tRNA end position 
atcatcgatc
Secondary structure (Cloverleaf model)
>WENV180095718	Pro	TGG
                   T      ATtt atcatcgatc
                     G - C
                     G - C
                     G - C
                     A - T
                     C - G
                     A - T
                     G - C          T A
                    T     G C G C C     A
    C C G A        G      | | | | |     A
  T         T G G G       C G C G G     C
  G           | | +                 T T
  G         T C C T
    T C T A        C     GGAC
                    G + T
                    A - T
                    G - C
                    G + T
                    G - C
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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