The detailed information of tRNA gene sequence


Sequence ID>WENV180095989
Genome IDMTBK01100958
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 573
End posion on genome 500
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
tgcggaccgg
tRNA gene sequence 
GGGCCCGTAGCTTAGCCAGGTTGAGCGCACGGCTGATAACCGTGAGGTCACGCGTTCAAA
TCGCGTCGGGCCCAtct
Downstream region at tRNA end position 
ttttattaaa
Secondary structure (Cloverleaf model)
>WENV180095989	Ile	GAT
                   g      Atct ttttattaaa
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     T G C G C     A
      C G A        A      | | | | |     A
    C       T T C G       A C G C G     C
    A       + | | |                 T T
    G       G A G C
      G T T        G     AGGTC
                    C - G
                    A - T
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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