The detailed information of tRNA gene sequence


Sequence ID>WENV180096355
Genome IDMTBK01125356
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 548
End posion on genome 622
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
gcaaaatttt
tRNA gene sequence 
GGGGTATTAGCTCAGTTGGCTAGAGCGCTTGCATGGCATGCAAGAGGTCATCGGTTCGAC
TCCGATATGCTCCACaa
Downstream region at tRNA end position 
taaagttttt
Secondary structure (Cloverleaf model)
>WENV180096355	Ala	GGC
                   t      ACaa taaagttttt
                     G - C
                     G - C
                     G + T
                     G - C
                     T + G
                     A - T
                     T - A          T C
                    T     T A G C C     A
      T G A        A      | | | | |     G
    T       C T C G       A T C G G     C
    G       | | | |                 T T
    G       G A G C
      C T A        G     AGGTC
                    C - G
                    T - A
                    T - A
                    G - C
                    C - G
                  A       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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