The detailed information of tRNA gene sequence


Sequence ID>WENV180096492
Genome IDMTBK01132258
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 7315
End posion on genome 7229
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
ccggatctgT
tRNA gene sequence 
GCCGAGGTAGTCTAGTCCGGGAAGGCGGTGGCCTCGAAAGCCACTGGTGTTCGGCACCTC
GGGAGTTCAAATCTCCCCCTCGGCGTtt
Downstream region at tRNA end position 
tagtacgaaa
Secondary structure (Cloverleaf model)
>WENV180096492	Ser	CGA
                   T      GTtt tagtacgaaa
                     G - C
                     C - G
                     C - G
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C C C T C     A
      T G A        A      | | | | |     A
    C       T C T G       G G G A G     C
    C       | | + |                 T T
    G       A G G C
      G G A        G     TGGTGTTCGGCACCTC
                    G - C
                    T - A
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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