The detailed information of tRNA gene sequence


Sequence ID>WENV180097289
Genome IDMTBK01178992
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 31181
End posion on genome 31267
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
gcggttctgT
tRNA gene sequence 
GCCGAGGTAGTCTAGTCCGGGAAGGCGGTGGCCTCGAAAGCCACTGGTGCTTGGCACCTC
GGGAGTTCAAATCTCCCCCTCGGCGTtt
Downstream region at tRNA end position 
tgacgcaaaa
Secondary structure (Cloverleaf model)
>WENV180097289	Ser	CGA
                   T      GTtt tgacgcaaaa
                     G - C
                     C - G
                     C - G
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C C C T C     A
      T G A        A      | | | | |     A
    C       T C T G       G G G A G     C
    C       | | + |                 T T
    G       A G G C
      G G A        G     TGGTGCTTGGCACCTC
                    G - C
                    T - A
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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