The detailed information of tRNA gene sequence


Sequence ID>WENV180097564
Genome IDMTBK01196603
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 3335
End posion on genome 3410
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
tggagcgtat
tRNA gene sequence 
CGGGGTGTAGCGCAGTTGGTAGCGTACCTGCTTTGGGAGCAGGTGGTCGTCCGTTCGAGC
CGGGCCACCCCGACCA
Downstream region at tRNA end position 
tgccaaacag
Secondary structure (Cloverleaf model)
>WENV180097564	Pro	TGG
                   t      ACCA tgccaaacag
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          C G
                    T     C G G G C     A
      T G A        A      | + | | |     G
    T       C G C G       G T C C G     C
    G       | | | +                 T T
    G       G C G T
      T A          A     TGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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