The detailed information of tRNA gene sequence


Sequence ID>WENV180097632
Genome IDMTBK01200820
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 16702
End posion on genome 16774
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
agtccctata
tRNA gene sequence 
GGGCCCGTAGCATAGCTGGTGGTGCACCCGGCTGATAACCGGGAGGTCGTGCGTTCGAAT
CGCATCGGGCCCAtcg
Downstream region at tRNA end position 
ttcttttatc
Secondary structure (Cloverleaf model)
>WENV180097632	Ile	GAT
                   a      Atcg ttcttttatc
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     T A C G C     A
      C G A        A      + | | | |     G
    T       T A C G       G T G C G     C
    G       + | | |                 T T
    G       G T G C
      T G          A     AGGTC
                    C - G
                    C - G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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