The detailed information of tRNA gene sequence


Sequence ID>WENV180097842
Genome IDMTBK01213958
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 10
End posion on genome 83
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
ngcatcccat
tRNA gene sequence 
AGGGCGGTGGCTCAATTGGTAGAGCAGCGGTCTCCAAAACCGCAGGTTGCAGGTTCGAGT
CCTGTCCGCCCTGCgc
Downstream region at tRNA end position 
gtcggcccag
Secondary structure (Cloverleaf model)
>WENV180097842	Trp	CCA
                   t      GCgc gtcggcccag
                     A - T
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C          T G
                    T     T G T C C     A
      T A A        G      + | | | |     G
    T       C T C G       G C A G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     AGGTT
                    G - C
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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