The detailed information of tRNA gene sequence


Sequence ID>WENV180097958
Genome IDMTBK01220384
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 1312
End posion on genome 1238
Amino Acid Phe
Anticodon GAA
Upstream region at tRNA start position 
actcatagtT
tRNA gene sequence 
GGCTCGGTAGCTCAGTTGGTAGAGCAATGGATTGAAGCTCCATGTGTCGGCGGTTCGATT
CCGTCTCGCGCCATta
Downstream region at tRNA end position 
tggaggagta
Secondary structure (Cloverleaf model)
>WENV180097958	Phe	GAA
                   T      ATta tggaggagta
                     G - C
                     G - C
                     C - G
                     T   C
                     C - G
                     G - C
                     G + T          T T
                    T     C T G C C     A
      T G A        A      | + | | |     G
    T       C T C G       G G C G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GTGTC
                    A - T
                    T - A
                    G - C
                    G - C
                    A - T
                  T       C
                  T       G
                    G A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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