The detailed information of tRNA gene sequence


Sequence ID>WENV180098126
Genome IDMTBK01229765
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 158
End posion on genome 85
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
aattgactta
tRNA gene sequence 
GGGCGGTTAGCTCAGTTGGCTAGAGCGCCTGCCTTACAAGCAGGATGTCGGGGGTTCAAG
TCCCTCACCGCCCAgtg
Downstream region at tRNA end position 
ttgtaaagcg
Secondary structure (Cloverleaf model)
>WENV180098126	Val	TAC
                   a      Agtg ttgtaaagcg
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C
                     T - A          T G
                    T     C T C C C     A
      T G A        A      | + | | |     A
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      C T A        G     ATGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       A
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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