The detailed information of tRNA gene sequence


Sequence ID>WENV180098160
Genome IDMTBK01231495
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 130
End posion on genome 54
Amino Acid Pro
Anticodon GGG
Upstream region at tRNA start position 
actatcgagt
tRNA gene sequence 
CGGGACGTAGCGCAGCCTGGTAGCGCACACGCTTGGGGTGCGTGTGGTCGGTGGTTCAAA
TCCACTCGTCCCGACCA
Downstream region at tRNA end position 
tttccttttt
Secondary structure (Cloverleaf model)
>WENV180098160	Pro	GGG
                   t      ACCA tttccttttt
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T
                     C - G
                     G - C          T A
                    T     T C A C C     A
      C G A        A      + | | | |     A
    C       C G C G       G G T G G     C
    T       | | | |                 T T
    G       G C G C
      G T A        A     TGGTC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  T       T
                  T       G
                    G G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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