The detailed information of tRNA gene sequence


Sequence ID>WENV180098557
Genome IDMTBK01253124
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 105
End posion on genome 180
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
tcaaattacc
tRNA gene sequence 
GGGCAGGTAGATCAGTTGGAAGATCGCTACATTGGCATTGTAGAGGTCGCGAGTTCGAAT
CTCGCCCTGTCCACCA
Downstream region at tRNA end position 
ttcctctttt
Secondary structure (Cloverleaf model)
>WENV180098557	Ala	GGC
                   c      ACCA ttcctctttt
                     G - C
                     G - C
                     G + T
                     C - G
                     A - T
                     G - C
                     G - C          T A
                    T     C G C T C     A
      T G A        A      | | | | |     G
    T       C T A G       G C G A G     C
    G       | | | |                 T T
    G       G A T C
      A A          G     AGGTC
                    C - G
                    T - A
                    A - T
                    C - G
                    A - T
                  T       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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