The detailed information of tRNA gene sequence


Sequence ID>WENV180098561
Genome IDMTBK01254050
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 8465
End posion on genome 8379
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
gccagcttgT
tRNA gene sequence 
GCCGAGGTAGTCTAGTCCGGGAAGGCGGTGGCCTCGAAAGCCACTGGTGTTCAACACCTC
GGGAGTTCAAATCTCCCCCTCGGCGTtt
Downstream region at tRNA end position 
taggataaaa
Secondary structure (Cloverleaf model)
>WENV180098561	Ser	CGA
                   T      GTtt taggataaaa
                     G - C
                     C - G
                     C - G
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C C C T C     A
      T G A        A      | | | | |     A
    C       T C T G       G G G A G     C
    C       | | + |                 T T
    G       A G G C
      G G A        G     TGGTGTTCAACACCTC
                    G - C
                    T - A
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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