The detailed information of tRNA gene sequence


Sequence ID>WENV180098753
Genome IDMTBK01265028
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 895
End posion on genome 824
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
ctaatagggc
tRNA gene sequence 
GGGCCGGTAGATCAGTGGGAGATCGCTACCTTGGCATGGTAGAGGCCGCGGGTTCAATTC
CCGCTCGGTCCAttt
Downstream region at tRNA end position 
ttcaaaagtt
Secondary structure (Cloverleaf model)
>WENV180098753	Ala	GGC
                   c      Attt ttcaaaagtt
                     G - C
                     G - C
                     G + T
                     C - G
                     C - G
                     G - C
                     G + T          T T
                    T     C G C C C     A
        G A        A      | | | | |     A
      T     C T A G       G C G G G     C
      G     | | | |                 T T
      G     G A T C
        G A        G     AGGCC
                    C - G
                    T - A
                    A - T
                    C - G
                    C - G
                  T       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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