The detailed information of tRNA gene sequence


Sequence ID>WENV180099138
Genome IDNIWG01001164
Search identical group
Phylum/Class[NIWG] ciliate metagenome; three single ciliate cells amplified by MDA; sediment
Species
Start position on genome 643
End posion on genome 556
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
aattaatttt
tRNA gene sequence 
GGAGGAGTGGCCGAGCGGCTGAAGGCGGCGGTCTTGAAAACCGTTAAGTGTCAAAGCTTC
GTGGGTTCGAATCCTACCTCCTCCGCCA
Downstream region at tRNA end position 
cattgtaagg
Secondary structure (Cloverleaf model)
>WENV180099138	Ser	TGA
                   t      GCCA cattgtaagg
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     A - T
                     G - C          T A
                    T     C A T C C     A
      C G A        G      | | + | |     G
    G       G C C G       G T G G G     C
    G         | | |                 T T
    C       A G G C
      T G A        G     TAAGTGTCAAAGCTTC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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