The detailed information of tRNA gene sequence


Sequence ID>WENV180105724
Genome IDOAPD01171326
Search identical group
Phylum/Class[OAPD] marine metagenome; 2010
Species
Start position on genome 255
End posion on genome 344
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
cgcgcccatc
tRNA gene sequence 
GGAGAGGTGGCTGAGTGGCTGAAGGCGCACGCCTGGAAAGTGTGTTTAGGTTAACCCCTA
ACGAGGGTTCGAATCCCTCTCTCTCCGCCA
Downstream region at tRNA end position 
ttatttcagt
Secondary structure (Cloverleaf model)
>WENV180105724	Ser	GGA
                   c      GCCA ttatttcagt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G T C G       G A G G G     C
    G         + | |                 T T
    C       A G G C
      T G A        G     TTTAGGTTAACCCCTAAC
                    C - G
                    A - T
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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