The detailed information of tRNA gene sequence


Sequence ID>WENV180105791
Genome IDOAPE01000172
Search identical group
Phylum/Class[OAPE] marine metagenome; Sterivex cartridges
Species
Start position on genome 1688
End posion on genome 1613
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
actaatatga
tRNA gene sequence 
AGGAGTGTAGCTCAATTGGTAGAGCGCCGGTCTCCAAAACCGGAGGTTGCGGGTTCGATG
CCTGCCACTCCTGCCA
Downstream region at tRNA end position 
aaaaagtaaa
Secondary structure (Cloverleaf model)
>WENV180105791	Trp	CCA
                   a      GCCA aaaaagtaaa
                     A - T
                     G - C
                     G - C
                     A - T
                     G - C
                     T - A
                     G - C          G T
                    T     C G T C C     A
      T A A        A      | | + | |     G
    T       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     AGGTT
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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