The detailed information of tRNA gene sequence


Sequence ID>W141009000
Genome IDAHBH01000180
Search identical group
Phylum/ClassUnclassified
Speciesmarine metagenome bacterium SAR86B [AHBH]
Start position on genome 15114
End posion on genome 15025
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
gcatccattt
tRNA gene sequence 
GGAGAGATGGCAGAGTCTGGTTTAATGCACCATCTTGGAAGGGTGGCGTACGGCAACGTA
CCGAGGGTTCGAATCCCTCTCTCTCCGCCA
Downstream region at tRNA end position 
attttattaa
Secondary structure (Cloverleaf model)
>W141009000	Ser	GGA
                   t      GCCA attttattaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
    C T G A        G      | | | | |     G
  T         G A C G       G A G G G     C
  G           | | |                 T T
  G         A T G C
    T T T A        A     CGTACGGCAACGTACC
                    C - G
                    C - G
                    A - T
                    T + G
                    C - G
                  T       G
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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