The detailed information of tRNA gene sequence


Sequence ID>w008232
Genome IDAAJK01000020
Search identical group
Phylum/ClassBetaproteobacteria
SpeciesRhodoferax ferrireducens DSM 15236 [AAJK]
Start position on genome 75131
End posion on genome 75054
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
ttctggtttT
tRNA gene sequence 
GGGGGTGTAGCTCAGCTGGGAGAGCGGCTGCTTTGCAAGCAGTAGGTAGCGGGTTCGAGT
CCTGTCACCTCCACCA
Downstream region at tRNA end position 
Atcttctcgc
Secondary structure (Cloverleaf model)
>w008232	Ala	TGC
                   T      ACCA Atcttctcgc
                     G - C
                     G - C
                     G + T
                     G - C
                     G - C
                     T - A
                     G - C          T G
                    T     T G T C C     A
      C G A        A      + | + | |     G
    T       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTA
                    G + T
                    C - G
                    T - A
                    G - C
                    C - G
                  T       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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