The detailed information of tRNA gene sequence


Sequence ID>W141009821
Genome IDAHPF01000013
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesBartonella quintana JK 63 [AHPF]
Start position on genome 55545
End posion on genome 55621
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tgtctgtttt
tRNA gene sequence 
GGCGGAGTAGCTCAGTAGGTTAGAGCAGAGGAATCATAATCCTTGTGTCGGGGGTTCAAA
TCCCTCCTCCGCTACCA
Downstream region at tRNA end position 
ttttctttca
Secondary structure (Cloverleaf model)
>W141009821	Met	CAT
                   t      ACCA ttttctttca
                     G + T
                     G - C
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C          T A
                    T     C T C C C     A
      T G A        A      | + | | |     A
    A       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GTGTC
                    G + T
                    A - T
                    G - C
                    G - C
                    A - T
                  A       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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