The detailed information of tRNA gene sequence


Sequence ID>W141010027
Genome IDAHPK01000017
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesBartonella rochalimae ATCC BAA-1498 [AHPK]
Start position on genome 2359
End posion on genome 2435
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
tttcctcgta
tRNA gene sequence 
GGGCTTGTAGCTCAGTCGGTTAGAGCGCGCGCTTGATAAGCGTGAGGTCGGAGGTTCAAG
TCCTCCCAGGCCCACCA
Downstream region at tRNA end position 
gttccgctat
Secondary structure (Cloverleaf model)
>W141010027	Ile	GAT
                   a      ACCA gttccgctat
                     G - C
                     G - C
                     G - C
                     C - G
                     T + G
                     T - A
                     G - C          T G
                    T     C C T C C     A
      T G A        A      | | | | |     A
    C       C T C G       G G A G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    G + T
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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