The detailed information of tRNA gene sequence


Sequence ID>w007218
Genome IDAAIK01000054
Search identical group
Phylum/ClassChlorobiota
SpeciesPelodictyon phaeoclathratiforme BU-1 [AAIK]
Start position on genome 11059
End posion on genome 11136
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
ttgatagtaT
tRNA gene sequence 
ACGTCAGTAGCTTAATTGGTAGAGCAGCGGTCTCCAAAACCGCAGGTTGGGGGTTCGATT
CCCTCCTGACGTGCAC
Downstream region at tRNA end position 
Gcagaaaaaa
Secondary structure (Cloverleaf model)
>w007218	Trp	CCA
                   T      GCAC Gcagaaaaaa
                     A - T
                     C - G
                     G - C
                     T - A
                     C - G
                     A - T
                     G - C          T T
                    T     C T C C C     A
      T A A        A      | + | | |     G
    T       T T C G       G G G G G     C
    G       + | | |                 T T
    G       G A G C
      T A          A     AGGTT
                    G - C
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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