The detailed information of tRNA gene sequence


Sequence ID>w007187
Genome IDAAIK01000007
Search identical group
Phylum/ClassChlorobiota
SpeciesPelodictyon phaeoclathratiforme BU-1 [AAIK]
Start position on genome 12008
End posion on genome 12086
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ccggtaaaaT
tRNA gene sequence 
GGTGAGGTAGCTCAGTTGGTTAGAGCACAGGATTCATAACCCTGAGGTCGAGGGTTCAAC
TCCCTCTCTCACCACCA
Downstream region at tRNA end position 
Ctgtaaagcg
Secondary structure (Cloverleaf model)
>w007187	Met	CAT
                   T      ACCA Ctgtaaagcg
                     G - C
                     G - C
                     T - A
                     G - C
                     A - T
                     G - C
                     G + T          T C
                    T     C T C C C     A
      T G A        A      | | | | |     A
    T       C T C G       G A G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     AGGTC
                    C - G
                    A - T
                    G - C
                    G - C
                    A   C
                  T       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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