The detailed information of tRNA gene sequence


Sequence ID>w007169
Genome IDAAIJ01000010
Search identical group
Phylum/ClassChlorobiota
SpeciesProsthecochloris aestuarii DSM 271 [AAIJ]
Start position on genome 42123
End posion on genome 42200
Amino Acid Ala
Anticodon CGC
Upstream region at tRNA start position 
agagctgtcT
tRNA gene sequence 
GGGGCTTTAGCTCAGTTGGTAGAGCGTCTCGTTCGCAATGAGAAGGTCAGGGGTTCGACT
CCCCTAAGCTCCACAT
Downstream region at tRNA end position 
Gaggtctgtt
Secondary structure (Cloverleaf model)
>w007169	Ala	CGC
                   T      ACAT Gaggtctgtt
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     T - A
                     T - A          T C
                    T     T C C C C     A
      T G A        A      | | | | |     G
    T       C T C G       A G G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     AGGTC
                    T - A
                    C - G
                    T - A
                    C - G
                    G + T
                  T       A
                  T       A
                    C G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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