The detailed information of tRNA gene sequence


Sequence ID>w007153
Genome IDAAIJ01000004
Search identical group
Phylum/ClassChlorobiota
SpeciesProsthecochloris aestuarii DSM 271 [AAIJ]
Start position on genome 39459
End posion on genome 39383
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
caggattacc
tRNA gene sequence 
GGTGAGGTAGCTCAGTTGGTTAGAGCACAGGATTCATAACCCTGAGGTCGAGGGTTCAAA
TCCCTCCCTCACCACAT
Downstream region at tRNA end position 
attattgttg
Secondary structure (Cloverleaf model)
>w007153	Met	CAT
                   c      ACAT attattgttg
                     G - C
                     G - C
                     T - A
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        A      | | | | |     A
    T       C T C G       G A G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     AGGTC
                    C - G
                    A - T
                    G - C
                    G - C
                    A   C
                  T       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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