The detailed information of tRNA gene sequence


Sequence ID>w007152
Genome IDAAIJ01000004
Search identical group
Phylum/ClassChlorobiota
SpeciesProsthecochloris aestuarii DSM 271 [AAIJ]
Start position on genome 81030
End posion on genome 80937
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tattttttca
tRNA gene sequence 
GGAGAGGTGGCCGAGCGGCTGAAGGCAACGGTTTGCTAAACCGTCATAGTTCTAACAAGG
GCTATCGAGGGTTCGAATCCCTCTCTCTCCGCAG
Downstream region at tRNA end position 
caagaaaaag
Secondary structure (Cloverleaf model)
>w007152	Ser	GCT
                   a      GCAG caagaaaaag
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     C T C C C     A
      C G A        G      | | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    C       A G G C
      T G A        A     CATAGTTCTAACAAGGGCTATC
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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