The detailed information of tRNA gene sequence


Sequence ID>w006985
Genome IDAAIC01000541
Search identical group
Phylum/ClassChlorobiota
SpeciesChlorobium phaeobacteroides BS1 [AAIC]
Start position on genome 1420
End posion on genome 1328
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
aaaagtattT
tRNA gene sequence 
GGAGAGGTGCTCGAGTGGCTGAAGAGGCTCGCCTGGAAAGCGGGTATACCCCAAAAGGGT
ATCGCGGGTTCGAATCCCGCTCTCTCCGCAA
Downstream region at tRNA end position 
Gacggagaaa
Secondary structure (Cloverleaf model)
>w006985	Ser	GGA
                   T      GCAA Gacggagaaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     C G C C C     A
      T G A        G      | | | | |     G
    G       G C T C       G C G G G     C
    G         | | |                 T T
    C       A G A G
      T G A        G     TATACCCCAAAAGGGTATC
                    C - G
                    T + G
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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